My research experiences have spanned genomics, virology, mathematical modeling, cancer biology, and even a bit on surgical oncology. Here is a list of all my publications and presentations, including those currently in prep and in review.
ORCID: 0000-0002-0390-5425
Papers
Kreitman A+, Mushegian A+, Nelson MI, Banakis S, Mederos C, Chung M, Roder A, Peguero A, Mueses S, Cuevas P, Paulino-Ramírez R, Ghedin E. Genomic analysis reveals dynamics of SARS-CoV-2 during the initial phases of the COVID-19 outbreak in the Dominican Republic. Microbiol Spectr. 2026 Jan 23:e0110525. doi: 10.1128/spectrum.01105-25. [Pubmed](https://pubmed.ncbi.nlm.nih.gov/41575210/)
Mushegian A+, Kreitman A+, Nelson MI, Chung M, Mederos C, Roder A, Banakis S, Desormeaux AM, Jean Charles NL, Grant-Greene Y, Marseille S, Pierre K, Lafontant D, Boncy J, Journel I, Buteau J, Juin S, Ghedin E. (2024) Genomic analysis of the early COVID-19 pandemic in Haiti reveals Caribbean-specific variant dynamics. PLOS Glob Public Health. Pubmed
Roder, A., Johnson, K., Knoll, M., Khalfan, M., Wang, B., Banakis, S., Kreitman, A., Mederos, C., Wang, W., Ruchnewitz, D., Samanovic, M., Mulligan, M., Lassig, M., Łuksza, M., Shultz-Cherry, S., Gresham, D., and Ghedin, E.. (2023). Optimized quantification of intra-host viral diversity in SARS-CoV-2 and influenza virus sequence data. mbio Pubmed
Epling, B. P., Rocco, J. M., Boswell, K. L., Laidlaw, E., Galindo, F., Kellogg, A., Das, S., Roder, A., Ghedin, E., Kreitman, A., Dewar, R. L., Kelly, S., Kalish, H., Rehman, T., Highbarger, J., Rupert, A., Kocher, G., Holbrook, M. R., Lisco, A., Manion, M., Sereti, I. (2022). Clinical, Virologic, and Immunologic Evaluation of Symptomatic Coronavirus Disease 2019 Rebound Following Nirmatrelvir/Ritonavir Treatment. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America, ciac663. Advance online publication. Pubmed
Saharia, K., Ramelli, S., Stein, S., Roder, A.E., Kreitman, A., Banakis, S., Chung, J.Y., Burbelo, P., Singh, P., Reed, R., Patel, V., Rabin, P., Krupnick, A., Cohen, R., de Wit, E., Ghedin, E., Hewitt, S.,. Vannella, S., Chertow, S., Grazioli, A. (2022). Successful lung transplantation using an allograft from a COVID-19 recovered donor. American Journal of Transplantation. Pubmed
Stier, M. W., Chapman, C. G., Kreitman, A., Hart, J. A., Xiao, S. Y., Siddiqui, U. D., & Waxman, I. (2018). Dissection-enabled scaffold-assisted resection (DeSCAR): a novel technique for resection of residual or non-lifting GI neoplasia of the colon (with video). Gastrointestinal endoscopy, 87(3), 843–851. Pubmed
In Prep / In Review
Li, C.+, Kreitman, A.+, Dukic, V., Dwyer, G. (2024). Bayesian Inference of HIV selection rate under different drug environments. (in revision)
Presentations & Posters
Kreitman, A., Mushegian, A., Long, S., Olsen, R., Christensen, P., Subedi, S., Chung, M., Davis, J., Musser, J., Ghedin, E. (2022). Prediction of COVID-19 disease severity using SARS-CoV-2 single nucleotide polymorphisms. National Institutes of Health Postbac Poster Day.
Kreitman, A., Maung, I., Maier, M., Hatton, H. (2021). Regulation of MCL1 and TSC1 by Epstein Barr Virus Latent Membrane Protein 1. Colorado College Senior Thesis day. Colorado College Thesis Archive
Kreitman, A., Moran, M., Hatton, H. (2020). The Hallmarks of Cancer in Epstein Barr Virus related B cell lymphomas. Colorado College Summer Research Symposium Poster Day.